LOVD GATA1 homepage

General information
Gene name GATA binding protein 1 (globin transcription factor 1)
Gene symbol GATA1
Chromosome Location Xp11.23
Database location www.dbagenes.unito.it
Curator I. Boria and U. Ramenghi
PubMed references View all (unique) PubMed references in the GATA1 database
Date of creation February 20, 2014
Last update February 20, 2014
Version GATA1 140220
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Reference sequence file coding DNA reference sequence for describing sequence variants
Genomic refseq ID NC_000023.11
Transcript refseq ID NM_002049.3
Total number of unique DNA variants reported 0
Total number of individuals with variant(s) 0
Total number of variants reported 0
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NOTE The GATA1 gene comprises 6 exons spanning 7.7 kB genomic length gene. The predicted size of the primary transcript is 1501 bp; it encodes for a 413 amino acid protein (MW 42.6 kDa). There is a short isoform encoded from the same transcript that is 83 aa shorter; it appears relevant for DBA pathogenesis.
This database was partially supported by the ENERCA (European Network for Rare and Congenital Anaemias) project.


Graphical displays and utilities
Summary tables Summary of all sequence variants in the GATA1 database, sorted by type of variant (with graphical displays and statistics)
UCSC Genome Browser Show variants in the UCSC Genome Browser (compact view)
Ensembl Genome Browser Show variants in the Ensembl Genome Browser (compact view)
NCBI Sequence Viewer Show distribution histogram of variants in the NCBI Sequence Viewer

Links to other resources
HGNC 4170
Entrez Gene 2623
OMIM - Gene 305371
OMIM - Disease 300835 (Anemia, X-linked, with/without neutropenia and/or platelet abnormalities)
UniProtKB (SwissProt/TrEMBL) P15976
HGMD GATA1

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